Saturday, 19 November 2011

PDBe deposition

From: Ed Pozharski
Date: 1 November 2011 17:58



For reasons I cannot explain even to myself I chose to use the PDBe to
deposit the next structure (instead of RCSB).  Curiosity may be one.

This is a protein-DNA complex refined with latest refmac/coot and it
uses (I presume) the modern naming convention (i.e. DA/DT/DG/DC for
nucleotide names).

Does anyone know why the PDBe deposition tool decided to treat these
standard nucleotides as heterogens?  This looks like a very basic issue.

Cheers,

Ed.

--
After much deep and profound brain things inside my head,
I have decided to thank you for bringing peace to our home.
                                   Julian, King of Lemurs

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