Good way to check ion sites on Coot

From: Andre Godoy
Date: 13 April 2012 20:57

Dear all.

can someone tell me what is the best way to check for ion binding sites on my structure?

I mean, a text with coordination examples, or maybe a tool on coot for it ...

best wishes

Andre 

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From: Zhijie Li

Hi

This is what I do:

Validate---->Highly coordinated waters

 

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From: Marc Kvansakul

Hi Andre, 

Majorie Harding wrote a few nice papers on metal ion binding sites and their associated coordination geometry, examples are:

Harding MM (2006) Acta D vol. 62 pp. 678-82 or Harding MM (2004) Acta D vol. 60 pp. 849-59

Best 

Marc

Dr. Marc Kvansakul

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From: Eleanor Dodson


And Marjorie Hardings results are nicely tabulated on a web site.. 

Google for it

Eleanor