Sunday 13 November 2011

webserver for molscript

From: faisal tarique
Date: 24 October 2011 13:48


Hello everyone

Is there any online server which could convert 3D structure of a protein into 2D image, the way program molscript does ?

--
Regards

Faisal
School of Life Sciences
JNU


----------
From: Ed Pozharski


One option is to directly access the PDB repository: the same images
that appear when you open a structure on the website.  The images are
in

http://www.rcsb.org/pdb/images/<pdb-id>_asym_r_<resolution>.jpg

For example, if you want the image of the asymmetric unit of the 3LGH at
500x500 size, just do this (I assume *nix)

wget http://www.rcsb.org/pdb/images/3lgh_asym_r_500.jpg

You may also consider checking out alternatives here

http://molbiol-tools.ca/Protein_tertiary_structure.htm


Cheers,

Ed.




--
After much deep and profound brain things inside my head,
I have decided to thank you for bringing peace to our home.
                                   Julian, King of Lemurs


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